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Microarray Technology Basics
Definitions of accuracy, precision and specificity in microarrays | Definitions of accuracy, precision and specificity in microarrays |
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| Written by Triantafillos Paparountas | |
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Accuracy: can be defined as the degree of conformity of the measured quantity to its actual (true) value. Usually, measurements are affected by a bias, which makes the mean depart from the actual value. Given a set of measurements, the accuracy of the instrument or technique is usually measured by comparing some measure of central tendency of the measurements (e.g. mean and median) to the actual value. An ideally accurate technique would have the mean exactly equal to the actual value. Precision: (also called reproducibility or repeatability) is the degree to which repeated measurements of the same quantity will show the same or similar results. Usually,measurements are affected by an error that makes repeated measurements differ from each other. Given a set of measurements, the precision is usually measured by comparing some measure of dispersion (e.g. variance or standard deviation) with zero. An ideally precise technique would have all measurements exactly equal (zero variance). Specificity: in the context of DNA microarrays, refers to the ability of a probe to bind to a unique target sequence. A specific probe will provide a signal that is proportional to the amount of the target sequence only. A non-specific probe will provide a signal that is influenced by the presence of other molecules. The specificity of a probe can be diminished by cross-hybridization, a phenomenon in which sequences that are not strictly 1. Draghici, S., et al., Reliability and reproducibility issues in DNA microarray measurements. Trends Genet, 2006. 22(2): p. 101-9.
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